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1.
Mean Field Theory for Protein Side-chain Prediction: Improvements and Applications
by Francis-Lyon, Patricia A., Ph.D.  University of California, Davis. 2011: 146 pages; 3482127.
2.
Cooperative particle swarm optimization for combinatorial problems
by Lapizco-Encinas, Grecia C., Ph.D.  University of Maryland, College Park. 2009: 152 pages; 3391379.
4.
Computational antibody structure prediction and antibody-antigen docking
by Sircar, Aroop, Ph.D.  The Johns Hopkins University. 2010: 220 pages; 3424831.
5.
Energetic basis of coiled coil topology and oligomeric state specificity
by Ramos, Jorge, Ph.D.  City University of New York. 2009: 93 pages; 3349499.
7.
Structure Prediction and Design of Enzymes
by Contreras, Stephanie Cynthia, Ph.D.  University of California, Davis. 2019: 91 pages; 13902145.
8.
Structure Prediction and Variant Interpretation of Membrane Proteins Aided by Machine Learning Algorithms
by Li, Bian, Ph.D.  Vanderbilt University. 2018: 192 pages; 13917125.
9.
Prediction and recommendation in online media
by Yin, Dawei, Ph.D.  Lehigh University. 2013: 256 pages; 3598939.
11.
Physics-based design of protein -ligand binding
by Boas, F. Edward, Ph.D.  Stanford University. 2008: 127 pages; 3313808.
12.
Regulation by phosphorylation from an atomic perspective
by Narayanan, Arjun, Ph.D.  University of California, San Francisco. 2009: 156 pages; 3390105.
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Computational protein design with multiple functional and structural constraints
by Humphris, Elisabeth Lyn, Ph.D.  University of California, San Francisco. 2009: 189 pages; 3390110.
15.
Structure prediction and visualization in molecular biology
by Poultney, Christopher S., Ph.D.  New York University. 2010: 131 pages; 3408352.
16.
Leveraging Novel Information for Coarse-Grained Prediction of Protein Motion
by Putz, Ines, Ph.D.  Technische Universitaet Berlin (Germany). 2018: 185 pages; 27610097.
18.
The study and engineering of cellular signaling pathways
by Groban, Eli S., Ph.D.  University of California, San Francisco. 2008: 360 pages; 3339232.
20.
Computational Design of Protein-Ligand Interfaces Using RosettaLigand
by Allison, Brittany Ann, Ph.D.  Vanderbilt University. 2016: 155 pages; 13834927.
21.
Self-Assembly and Hydrogelation of Fmoc-Phenylalanine Derivatives
by Ryan, Derek M., Ph.D.  University of Rochester. 2011: 364 pages; 3478357.
22.
Computational physical modeling and design of protein -DNA interactions
by Ashworth, Justin, Ph.D.  University of Washington. 2009: 133 pages; 3394201.
23.
I. Progress Toward Leiodelide A II. Palladium-Catalyzed Reactions of Enol Ethers
by Lauer, Matthew Gregory, Ph.D.  The Ohio State University. 2012: 318 pages; 10631135.
24.
Model systems for molecular docking: Understanding molecular recognition in polar and charged binding sites
by Boyce, Sarah Emily, Ph.D.  University of California, San Francisco. 2009: 257 pages; 3390113.
25.
Link Discovery through Iterative Link Classification: Towards a Real-Time Analysis of Graph Evolution
by Pusala, Murali Krishna, Ph.D.  University of Louisiana at Lafayette. 2018: 116 pages; 10846556.
26.
Applying Evolutionary Computation and Ensemble Approaches to Protein Contact Map and Protein Function Determination
by Chapman, Samuel D., Ph.D.  North Carolina Agricultural and Technical State University. 2016: 153 pages; 10191042.
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Prediction of aircraft fuselage vibration
by Thomas, Rohan J., M.Engr.  The University of North Dakota. 2015: 115 pages; 1594387.
29.
Dynamic prediction of concurrency errors
by Sadowski, Caitlin Harrison, Ph.D.  University of California, Santa Cruz. 2012: 183 pages; 3521816.
30.
Beyond the Model and Into the Map: A Protein Abstract
by Fraser, James Solomon, Ph.D.  University of California, Berkeley. 2010: 104 pages; 3556045.
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