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1.
Characterization of protein residue surface accessibility using sequence homology
by Mishra, Radhika Pallavi, M.S.  San Jose State University. 2010: 155 pages; 1477358.
2.
Structure Prediction and Variant Interpretation of Membrane Proteins Aided by Machine Learning Algorithms
by Li, Bian, Ph.D.  Vanderbilt University. 2018: 192 pages; 13917125.
3.
Mean Field Theory for Protein Side-chain Prediction: Improvements and Applications
by Francis-Lyon, Patricia A., Ph.D.  University of California, Davis. 2011: 146 pages; 3482127.
4.
Applying Evolutionary Computation and Ensemble Approaches to Protein Contact Map and Protein Function Determination
by Chapman, Samuel D., Ph.D.  North Carolina Agricultural and Technical State University. 2016: 153 pages; 10191042.
5.
Identification of microRNA targets
by Krek, Azra, Ph.D.  New York University. 2009: 92 pages; 3365704.
6.
Automated five-axis tool path generation based on dynamic analysis
by Sibao, Wang, Ph.D.  National University of Singapore (Singapore). 2015: 149 pages; 10006099.
7.
In vivo fluorescence characterization of the Escherichia coli outer membrane protein FepA
by Smallwood, Chuck Randall, Ph.D.  The University of Oklahoma. 2012: 160 pages; 3544504.
9.
Scaffolding-mediated virus assembly: Visualization and characterization of bacteriophage T7 scaffolding protein
by Smith, Charles Stewart, Ph.D.  University of Maryland, College Park. 2009: 174 pages; 3359427.
10.
Statistical models for analyzing human genetic variation
by Sankararaman, Sriram, Ph.D.  University of California, Berkeley. 2010: 164 pages; 3413553.
12.
Physics-based design of protein -ligand binding
by Boas, F. Edward, Ph.D.  Stanford University. 2008: 127 pages; 3313808.
13.
Application of Graphical Models in Protein-Protein Interactions and Dynamics
by Vajdi Hoojghan, Amir, Ph.D.  University of Massachusetts Boston. 2018: 92 pages; 10982841.
14.
Engineered Microenvironment for Quantitative Studies of Neutrophil Migration
by Chung, Henry Hung Li, Ph.D.  University of Rochester. 2015: 161 pages; 3686523.
15.
Development of Computer Aided Drug Design Algorithms and Application to the APOBEC3 Family of Proteins
by Wagner, Jeffrey Robert Rothfeld, Ph.D.  University of California, San Diego. 2018: 143 pages; 10747265.
16.
The mechanistic and physical characterization of promiscuous aggregate-based inhibitors
by Coan, Kristin Emily deWeese, Ph.D.  University of California, San Francisco. 2008: 110 pages; 3339233.
17.
The Genetically Encodable Oriented Adsorption of Proteins onto Gold Nanoparticles
by Reed, Alison Mae Williams, Ph.D.  Georgetown University. 2011: 220 pages; 3478758.
19.
Structure prediction and visualization in molecular biology
by Poultney, Christopher S., Ph.D.  New York University. 2010: 131 pages; 3408352.
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Computational antibody structure prediction and antibody-antigen docking
by Sircar, Aroop, Ph.D.  The Johns Hopkins University. 2010: 220 pages; 3424831.
24.
Deciphering proteolytic signaling
by Timmer, John C., Ph.D.  University of California, San Diego. 2009: 155 pages; 3360418.
25.
The evolution of BARREN INFLORESCENCE1 and related AUX/IAA genes in angiosperms
by Child, Robert Joseph, M.S.  California State University, Long Beach. 2013: 82 pages; 1527538.
26.
A Framework for Scientific Discovery through Video Games
by Cooper, Seth, Ph.D.  University of Washington. 2011: 128 pages; 3501867.
27.
Regulation by phosphorylation from an atomic perspective
by Narayanan, Arjun, Ph.D.  University of California, San Francisco. 2009: 156 pages; 3390105.
28.
Computational Studies of Proteins: Dynamics and Interactions with Small Molecules
by Park, Min Sun, Ph.D.  University of Rochester. 2011: 109 pages; 3458547.
29.
Characterization of protein function using automated computational methods
by Wu, Shirley, Ph.D.  Stanford University. 2009: 179 pages; 3364515.
30.
Characterization of autotransporters of the Surface cell antigen (Sca) family in Rickettsia typhi
by Sears, Khandra T., Ph.D.  University of Maryland, Baltimore. 2011: 229 pages; 3490301.
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