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1.
The role of protein-protein interactions in shaping MAP kinase kinase identity
by Won, Angela P., Ph.D.  University of California, San Francisco. 2010: 140 pages; 3412282.
2.
Mean Field Theory for Protein Side-chain Prediction: Improvements and Applications
by Francis-Lyon, Patricia A., Ph.D.  University of California, Davis. 2011: 146 pages; 3482127.
3.
Application of Graphical Models in Protein-Protein Interactions and Dynamics
by Vajdi Hoojghan, Amir, Ph.D.  University of Massachusetts Boston. 2018: 92 pages; 10982841.
4.
Structure Prediction and Variant Interpretation of Membrane Proteins Aided by Machine Learning Algorithms
by Li, Bian, Ph.D.  Vanderbilt University. 2018: 192 pages; 13917125.
6.
Computational antibody structure prediction and antibody-antigen docking
by Sircar, Aroop, Ph.D.  The Johns Hopkins University. 2010: 220 pages; 3424831.
7.
Model systems for molecular docking: Understanding molecular recognition in polar and charged binding sites
by Boyce, Sarah Emily, Ph.D.  University of California, San Francisco. 2009: 257 pages; 3390113.
8.
Structure Prediction and Design of Enzymes
by Contreras, Stephanie Cynthia, Ph.D.  University of California, Davis. 2019: 91 pages; 13902145.
9.
Physics-based design of protein -ligand binding
by Boas, F. Edward, Ph.D.  Stanford University. 2008: 127 pages; 3313808.
10.
Computational Studies of Proteins: Dynamics and Interactions with Small Molecules
by Park, Min Sun, Ph.D.  University of Rochester. 2011: 109 pages; 3458547.
11.
Computational Identification of Protein-Peptide Interaction Specificity
by Barkan, David T., Ph.D.  University of California, San Francisco. 2011: 220 pages; 3493660.
12.
Leveraging Novel Information for Coarse-Grained Prediction of Protein Motion
by Putz, Ines, Ph.D.  Technische Universitaet Berlin (Germany). 2018: 185 pages; 27610097.
13.
Computational Design of Protein-Ligand Interfaces Using RosettaLigand
by Allison, Brittany Ann, Ph.D.  Vanderbilt University. 2016: 155 pages; 13834927.
15.
Identification and Characterization of Protein-Ligand Binding Modes via Molecular Dynamics
by Bremer, Parker Ladd, M.S.  California State University, Long Beach. 2019: 81 pages; 13859447.
17.
Gβγ acts at an inter-subunit cleft to activate GIRK1 channels
by Mahajan, Rahul, Ph.D.  Virginia Commonwealth University. 2014: 105 pages; 3614785.
18.
Computational and pharmacological modeling of membrane proteins
by Babakhani, Arneh, Ph.D.  University of California, San Diego. 2009: 178 pages; 3352453.
19.
Application and Development of Computational Tools in Drug Discovery
by Balius, Trent Erik, Ph.D.  State University of New York at Stony Brook. 2012: 190 pages; 3521714.
20.
Computational Analysis of Protein Intrinsic Disorder in Human Diseases
by Na, Insung, Ph.D.  University of South Florida. 2017: 188 pages; 10603424.
21.
Characterization of UBIAD1 and its role in Schnyder corneal dystrophy
by Nickerson, Michael L., Ph.D.  The George Washington University. 2011: 148 pages; 3422895.
22.
Computer-Aided Drug Design (CADD): Methodological Aspects and Practical Applications in Cancer Research
by Gianti, Eleonora, Ph.D.  University of the Sciences in Philadelphia. 2013: 342 pages; 3586939.
24.
RNA-protein structure classifiers incorporated into second-generation statistical potentials
by Kimura, Takayuki, M.S.  San Jose State University. 2016: 145 pages; 10241445.
27.
Development and Application of Incretin Receptor Models to Screen Anti-Obesity or Anti-Diabetic Agents
by Chaudhari, Rajan, Ph.D.  University of the Sciences in Philadelphia. 2015: 95 pages; 10169468.
28.
Computer-Aided Identification of New DNA Gyrase Inhibitors with Activity against Staphylococcus aureus
by Werner, Malela Mwamufiya, Ph.D.  University of the Sciences in Philadelphia. 2014: 143 pages; 3647093.
29.
Development of Computer Aided Drug Design Algorithms and Application to the APOBEC3 Family of Proteins
by Wagner, Jeffrey Robert Rothfeld, Ph.D.  University of California, San Diego. 2018: 143 pages; 10747265.
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