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1.
Metagenomics Adds Unrecognized Lineages to the Tree of Life and Enables a Genome-Resolved View of Microbiome Dynamics
by Brown, Christopher Thomas, Ph.D.  University of California, Berkeley. 2016: 162 pages; 10251228.
2.
Genome-Resolved Meta-Omics Analyses of Microbial Interactions in Mining-Impacted Systems
by Kantor, Rose Simone, Ph.D.  University of California, Berkeley. 2016: 125 pages; 10251153.
3.
Predicting “Essential” Genes in Microbial Genomes: A Machine Learning Approach to Knowledge Discovery in Microbial Genomic Data
by Palaniappan, Krishnaveni, Ph.D.  Nova Southeastern University. 2010: 252 pages; 3428281.
4.
Global Diversity and Function of Bacteria Associated with Wild and Domesticated Chickpea Root Nodules
by Greenlon, Alex, Ph.D.  University of California, Davis. 2018: 166 pages; 10837756.
5.
Composition and Functional Potential of Hadal Microbial Communities
by Peoples, Logan Maxwell, Ph.D.  University of California, San Diego. 2018: 315 pages; 10839723.
6.
The Interaction of Neonatal Intensive Care Unit Microbes with the Microbiome of the Developing Preterm Infant Gut
by Brooks, Brandon, Ph.D.  University of California, Berkeley. 2016: 121 pages; 10250683.
7.
Viral community dynamics and functional specialization in the Pacific Ocean
by Hurwitz, Bonnie L., Ph.D.  The University of Arizona. 2012: 201 pages; 3547321.
8.
Applications and extensions of pClust to big microbial proteomic data
by Lockwood, Svetlana, Ph.D.  Washington State University. 2016: 100 pages; 10139743.
9.
Assessing Carnobacterium maltaromaticum Infection Modes in Stranded Juvenile Common Thresher Sharks (Alopias vulpinus) and Two Other Lamnoid Species
by Martinez Steele, Laura, M.S.  California State University, Long Beach. 2019: 113 pages; 13423625.
10.
Diversity, Form, and Function Within the Marine Mammal Microbiota
by Dudek, Natasha K., Ph.D.  University of California, Santa Cruz. 2018: 203 pages; 10929175.
11.
Corrinoid Cross-Feeding in the Microbial World
by Dirks, Erica Christine, Ph.D.  University of California, Berkeley. 2014: 76 pages; 3686257.
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The impact of the microbiota on transcriptional regulation in the vertebrate intestine
by Camp, J. Grayson, Ph.D.  The University of North Carolina at Chapel Hill. 2012: 208 pages; 3549543.
14.
Bacteria Associated with Microbialites at Pisa Pond, Death Valley National Park, California
by Levish, Michelle, M.S.  California State University, Long Beach. 2019: 112 pages; 13424973.
15.
The Structural and Functional Distribution of Glycoside Hydrolases Across Databases
by Nguyen, Stanley Tam Cao, M.S.  California State University, Long Beach. 2019: 75 pages; 13424355.
17.
Exploring the genetic basis of chronic periodontitis: A genome-wide approach
by Divaris, Kimon, Ph.D.  The University of North Carolina at Chapel Hill. 2011: 299 pages; 3495471.
18.
A Journey to the Center of a Bacterial Organelle
by Erbilgin, Onur, Ph.D.  University of California, Berkeley. 2015: 183 pages; 10186584.
19.
Ecological and evolutionary relationships between bees and their bacterial gut microbiota
by Martinson, Vincent G., Ph.D.  The University of Arizona. 2012: 158 pages; 3505138.
21.
Clustering algorithms for next-generation sequencing data from heterogenous populations
by Prabhakara, Shruthi, Ph.D.  The Pennsylvania State University. 2012: 126 pages; 3737327.
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23.
Genome Assembly: Novel Applications by Harnessing Emerging Sequencing Technologies and Graph Algorithms
by Koren, Sergey, Ph.D.  University of Maryland, College Park. 2012: 238 pages; 3517547.
24.
Homology , Homoplasy and the Holobiont: A Comparative Genomics Approach
by Kamel, Bishoy, Ph.D.  The Pennsylvania State University. 2016: 72 pages; 13871846.
26.
The Paladin Suite: Multifaceted Characterization of Whole Metagenome Shotgun Sequences
by Westbrook, Anthony, M.S.  University of New Hampshire. 2017: 101 pages; 10685940.
27.
Cultivating Ecosystems: Microbial Communities in Recirculating Aquaculture Systems
by Bartelme, Ryan P., Ph.D.  The University of Wisconsin - Milwaukee. 2018: 169 pages; 10843723.
28.
Nonequilibrium Thermodynamics, Microbial Bioenergetics, and Community Ecology
by Roach, Ty Noble Frederick, Ph.D.  University of California, San Diego. 2018: 171 pages; 10827422.
29.
Analyzing Longitudinal Isolates in the Age of Affordable Sequencing
by Pekar, Jonathan Eugene, M.S.  University of California, San Diego. 2018: 55 pages; 10842733.
30.
Impact of Antibiotic Use on Resistance in Beef Feedlot and Dairy Cattle
by Rovira Sanz, Pablo, Ph.D.  Colorado State University. 2017: 141 pages; 10600088.
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