Dissertation/Thesis Abstract

Study of parallel MR imaging techniques
by Kim, Wan, M.S., State University of New York at Buffalo, 2015, 72; 1594739
Abstract (Summary)

In MRI, it is more desirable to scan less data as possible because it reduces MRI scanning time. We want to get a clear image by reconstructing the signals we acquire from the MRI machine. Special scanning or sampling techniques are needed to overcome this issue based on various mathematical methods.

We present an improved random sampling pattern for SAKE (simultaneous autocalibrating and k-space estimation) reconstruction and an iterative GRAPPA reconstruction using Wiener filter.

In our iterative method using Wiener filter, in contrast to the conventional GRAPPA where only the auto calibration signals (ACS) are used to find the convolution weights, our proposed method iteratively updates the convolution weights using both the acquired and reconstructed data from previous iterations in the entire k-space. To avoid error propagation, the method applies adaptive Wiener filter on the reconstructed data. Experimental results demonstrate that even with a smaller number of ACS lines the proposed method improves the SNR when compared to GRAPPA.

In compressed sensing MRI, it is very important to design sampling pattern for random sampling. For example, SAKE (simultaneous auto-calibrating and k-space estimation) is a parallel MRI reconstruction method using random undersampling. It formulates image reconstruction as a structured low-rank matrix completion problem. Variable density (VD) Poisson discs are typically adopted for 2D random sampling. The basic concept of Poisson disc generation is to guarantee samples are neither too close to nor too far away from each other. However, it is difficult to meet such a condition especially in the high density region. Therefore the sampling becomes inefficient. In this paper, we present an improved random sampling pattern for SAKE reconstruction. The pattern is generated based on a conflict cost with a probability model. The conflict cost measures how many dense samples already assigned are around a target location, while the probability model adopts the generalized Gaussian distribution which includes uniform and Gaussian-like distributions as special cases. Our method preferentially assigns a sample to a k-space location with the least conflict cost on the circle of the highest probability. To evaluate the effectiveness of the proposed random pattern, we compare the performance of SAKEs using both VD Poisson discs and the proposed pattern. Experimental results for brain data show that the proposed pattern yields lower normalized mean square error (NMSE) than VD Poisson discs.

Indexing (document details)
Advisor: Ying, Leslie
Commitee: Mastronarde, Nicholas, Su, Weifeng
School: State University of New York at Buffalo
Department: Electrical Engineering
School Location: United States -- New York
Source: MAI 54/06M(E), Masters Abstracts International
Source Type: DISSERTATION
Subjects: Biomedical engineering, Electrical engineering, Medical imaging
Keywords: Compressed sensing, Conflict cost, Generalized autocalibrating partially parallel acquistion, Parallel magnetic resonance imaging, Random sampling, Wiener filter
Publication Number: 1594739
ISBN: 9781321921892
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